{
  "_id": "6a3d6290a319ef9414478994",
  "Package": "gap.datasets",
  "Version": "0.0.6",
  "Date": "2023-8-14",
  "Title": "Datasets for 'gap'",
  "Authors@R": "c(person(\"Jing Hua\", \"Zhao\", role = c(\"aut\", \"cre\"),\nemail=\"jinghuazhao@hotmail.com\"),\nperson(\"Swetlana\", \"Herbrandt\", role = \"ctb\"))",
  "Description": "Datasets associated with the 'gap' package. Currently, it\nincludes an example data for regional association plot (CDKN),\nan example data for a genomewide association meta-analysis\n(OPG), data in studies of Parkinson's diease (PD), ALHD2\nmarkers and alcoholism (aldh2), APOE/APOC1 markers and\nSchizophrenia (apoeapoc), cystic fibrosis (cf), a Olink/INF\npanel (inf1), Manhattan plots with (hr1420, mhtdata) and\nwithout (w4) gene annotations.",
  "LazyData": "Yes",
  "LazyLoad": "Yes",
  "License": "GPL (>= 2)",
  "URL": "https://jinghuazhao.github.io/R/",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-25 17:14:24 UTC",
    "User": "root"
  },
  "RoxygenNote": "7.1.2",
  "Author": "Jing Hua Zhao [aut, cre], Swetlana Herbrandt [ctb]",
  "Maintainer": "Jing Hua Zhao <jinghuazhao@hotmail.com>",
  "Repository": "https://jinghuazhao.r-universe.dev",
  "Date/Publication": "2026-06-25 14:30:56 UTC",
  "RemoteUrl": "https://github.com/jinghuazhao/r",
  "RemoteRef": "HEAD",
  "RemoteSha": "31fbd2effe47c26b09718482dbd2035a04b975a4",
  "RemoteSubdir": "gap.datasets",
  "MD5sum": "d7255dbb0fa5b547a35df318ae65a416",
  "_user": "jinghuazhao",
  "_type": "src",
  "_file": "gap.datasets_0.0.6.tar.gz",
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  "_filesize": 2591407,
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  "_created": "2026-06-25T17:14:24.000Z",
  "_published": "2026-06-25T17:17:04.436Z",
  "_distro": "resolute",
  "_jobs": [
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  "_buildurl": "https://github.com/r-universe/jinghuazhao/actions/runs/28187564765",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/jinghuazhao/r",
  "_commit": {
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    "author": "jinghuazhao@github.com <jinghuazhao@hotmail.com>",
    "committer": "jinghuazhao@github.com <jinghuazhao@hotmail.com>",
    "message": "vignettes\n",
    "time": 1782397856
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  "_maintainer": {
    "name": "Jing Hua Zhao",
    "email": "jinghuazhao@hotmail.com",
    "login": "jinghuazhao",
    "description": "Methods and applications in human health-related research",
    "uuid": 12497005
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  "_dependencies": [
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      "version": ">= 2.10",
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  "_owner": "jinghuazhao",
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  "_updates": [
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  "_tags": [],
  "_topics": [
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    "imputation",
    "lmm"
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  "_stars": 13,
  "_contributors": [
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    "description": "Methods and applications in human health-related research"
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    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/gap.datasets"
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  "_devurl": "https://github.com/jinghuazhao/r",
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  "_assets": [
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    "extra/citation.json",
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    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
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  "_homeurl": "https://github.com/jinghuazhao/r",
  "_realowner": "jinghuazhao",
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  "_releases": [
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      "date": "2019-06-03"
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    {
      "version": "0.0.5",
      "date": "2022-05-09"
    },
    {
      "version": "0.0.6",
      "date": "2023-08-25"
    }
  ],
  "_exports": [],
  "_datasets": [
    {
      "name": "aldh2",
      "title": "ALDH2 markers and Alcoholism",
      "object": "aldh2",
      "class": [
        "data.frame"
      ],
      "fields": [
        "id",
        "y",
        "D12S2070.a1",
        "D12S2070.a2",
        "D12S839.a1",
        "D12S839.a2",
        "D12S821.a1",
        "D12S821.a2",
        "D12S1344.a1",
        "D12S1344.a2",
        "EXON12.a1",
        "EXON12.a2",
        "EXON1.a1",
        "EXON1.a2",
        "D12S2263.a1",
        "D12S2263.a2",
        "D12S1341.a1",
        "D12S1341.a2"
      ],
      "rows": 263,
      "table": true,
      "tojson": true
    },
    {
      "name": "apoeapoc",
      "title": "APOE/APOC1 markers and Alzheimer's",
      "object": "apoeapoc",
      "class": [
        "data.frame"
      ],
      "fields": [
        "id",
        "y",
        "sex",
        "age",
        "apoe.a1",
        "apoe.a2",
        "apoc.a1",
        "apoc.a2"
      ],
      "rows": 353,
      "table": true,
      "tojson": true
    },
    {
      "name": "CDKNgenes",
      "title": "An example data for regional association plot",
      "object": "CDKN",
      "class": [
        "data.frame"
      ],
      "fields": [
        "START",
        "STOP",
        "STRAND",
        "GENE"
      ],
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      "table": true,
      "tojson": true
    },
    {
      "name": "CDKNlocus",
      "title": "An example data for regional association plot",
      "object": "CDKN",
      "class": [
        "data.frame"
      ],
      "fields": [
        "CHR",
        "POS",
        "NAME",
        "PVAL",
        "RSQR"
      ],
      "rows": 88,
      "table": true,
      "tojson": true
    },
    {
      "name": "CDKNmap",
      "title": "An example data for regional association plot",
      "object": "CDKN",
      "class": [
        "data.frame"
      ],
      "fields": [
        "POS",
        "THETA",
        "DIST"
      ],
      "rows": 7264,
      "table": true,
      "tojson": true
    },
    {
      "name": "cf",
      "title": "Cystic fibrosis data",
      "object": "cf",
      "class": [
        "data.frame"
      ],
      "fields": [
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        "loc1",
        "loc2",
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      "rows": 186,
      "table": true,
      "tojson": true
    },
    {
      "name": "cnv",
      "title": "A CNV data",
      "object": "cnv",
      "class": [
        "data.frame"
      ],
      "fields": [
        "chr",
        "start",
        "end",
        "band",
        "freq"
      ],
      "rows": 602,
      "table": true,
      "tojson": true
    },
    {
      "name": "crohn",
      "title": "Crohn's disease data",
      "object": "crohn",
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    {
      "name": "fa",
      "title": "Friedreich Ataxia data",
      "object": "fa",
      "class": [
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      ],
      "fields": [
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        "loci1",
        "loci2",
        "loci3",
        "loci4",
        "loci5",
        "loci6",
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        "loci8",
        "loci9",
        "loci10",
        "loci11",
        "loci12"
      ],
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      "table": true,
      "tojson": true
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    {
      "name": "fsnps",
      "title": "A case-control data involving four SNPs with missing genotype",
      "object": "fsnps",
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      "table": true,
      "tojson": true
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    {
      "name": "hla",
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      "object": "hla",
      "class": [
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        "DQB.a2"
      ],
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      "table": true,
      "tojson": true
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    {
      "name": "hr1420",
      "title": "An example data for Manhattan plot with annotation",
      "object": "hr1420",
      "class": [
        "data.frame"
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      "fields": [
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        "P",
        "CHR",
        "POS",
        "colour"
      ],
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      "table": true,
      "tojson": true
    },
    {
      "name": "inf1",
      "title": "A data containing protein panel",
      "object": "inf1",
      "class": [
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      "fields": [
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        "target",
        "target.short",
        "gene",
        "chr",
        "start",
        "end"
      ],
      "rows": 92,
      "table": true,
      "tojson": true
    },
    {
      "name": "jma.cojo",
      "title": "A data containing independent GWAS hits as from GCTA",
      "object": "jma.cojo",
      "class": [
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        "uniprot"
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    {
      "name": "l51",
      "title": "An example pedigree data",
      "object": "l51",
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        "data.frame"
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      "fields": [
        "id",
        "fid",
        "mid",
        "sex",
        "aff",
        "qt"
      ],
      "rows": 51,
      "table": true,
      "tojson": true
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    {
      "name": "lukas",
      "title": "An example pedigree",
      "object": "lukas",
      "class": [
        "data.frame"
      ],
      "fields": [
        "id",
        "father",
        "mother",
        "sex"
      ],
      "rows": 85,
      "table": true,
      "tojson": true
    },
    {
      "name": "mao",
      "title": "A study of Parkinson's disease and MAO gene",
      "object": "mao",
      "class": [
        "data.frame"
      ],
      "fields": [
        "id",
        "type",
        "gender",
        "age",
        "aao",
        "aad",
        "updrs",
        "maoai2",
        "ai2code",
        "maobi2",
        "bi2code",
        "gtbex3",
        "bex3code",
        "maoavntr",
        "vntrcode",
        "vntrcod2",
        "maoa31",
        "mao31cod",
        "mao31co2"
      ],
      "rows": 340,
      "table": true,
      "tojson": true
    },
    {
      "name": "meyer",
      "title": "A pedigree data on 282 animals deriving from two generations",
      "object": "meyer",
      "class": [
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      "fields": [
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        "sire",
        "dam",
        "generation",
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      "table": true,
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    {
      "name": "mfblong",
      "title": "Example data for ACEnucfam",
      "object": "mfblong",
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