Package: gaawr2
Title: Genetic Association Analysis
Version: 0.0.9
Date: 2026-6-23
Authors@R: c(person("Jing Hua", "Zhao", , role = c("aut", "cre"),
                  email = "jinghuazhao@hotmail.com",
                  comment = c(ORCID = "https://orcid.org/0000-0002-1463-5870", ORCID = "0000-0003-4930-3582")),
           person("Benjamin", "Altmann", role = "ctb"),
           person("Brian", "Ripley", role = "ctb")
           )
Maintainer: Jing Hua Zhao <jinghuazhao@hotmail.com>
Description: This is a companion to Henry-Stewart talk by Zhao (2026,
        <doi:10.69645/FRFQ9519>), which gathers information, metadata
        and scripts to showcase modern genetic analysis -- ranging from
        testing of polymorphic variant(s) for Hardy-Weinberg
        equilibrium, association with traits using genetic and
        statistical models, Bayesian implementation, power calculation
        in study design, and genetic annotation. It also covers R
        integration with the Linux environment, GitHub, package
        creation and web applications. The earlier version by Zhao
        (2009, <doi:10.69645/DCRY5578>) provides a brief introduction
        to these topics.
License: MIT + file LICENSE
URL: https://jinghuazhao.github.io/gaawr2/,
        https://github.com/jinghuazhao/gaawr2
BugReports: https://github.com/jinghuazhao/gaawr2/issues
Encoding: UTF-8
Depends: R (>= 3.5.0)
Imports: dplyr, gap, gap.datasets, ggplot2, survival, Rdpack
RdMacros: Rdpack
VignetteBuilder: knitr
LazyData: Yes
LazyLoad: Yes
LazyDataCompression: xz
Suggests: BLR, BGLR, biomaRt, bookdown, Cairo, EnsDb.Hsapiens.v75,
        ensembldb, GMMAT, HardyWeinberg, haplo.stats, htmltools, httr,
        httpuv, jsonlite, kableExtra, knitr, MCMCglmm, plumber,
        powerEQTL, R2jags, regress, Rsamtools, SNPassoc, testthat,
        tidyr
Roxygen: list(markdown = TRUE)
Config/roxygen2/version: 8.0.0
Config/pak/sysreqs: cmake make libicu-dev libuv1-dev libssl-dev
Repository: https://jinghuazhao.r-universe.dev
Date/Publication: 2026-06-23 07:33:34 UTC
RemoteUrl: https://github.com/jinghuazhao/gaawr2
RemoteRef: HEAD
RemoteSha: 89f97fe2da318850a14ce3cfdced182640aaa7d2
NeedsCompilation: no
Packaged: 2026-06-23 10:42:48 UTC; root
Author: Jing Hua Zhao [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-1463-5870>, ORCID:
    <https://orcid.org/0000-0003-4930-3582>),
  Benjamin Altmann [ctb],
  Brian Ripley [ctb]