Package: gap.datasets 0.0.6
gap.datasets: Datasets for 'gap'
Datasets associated with the 'gap' package. Currently, it includes an example data for regional association plot (CDKN), an example data for a genomewide association meta-analysis (OPG), data in studies of Parkinson's diease (PD), ALHD2 markers and alcoholism (aldh2), APOE/APOC1 markers and Schizophrenia (apoeapoc), cystic fibrosis (cf), a Olink/INF panel (inf1), Manhattan plots with (hr1420, mhtdata) and without (w4) gene annotations.
Authors:
gap.datasets_0.0.6.tar.gz
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gap.datasets.pdf |gap.datasets.html✨
gap.datasets/json (API)
| # Install 'gap.datasets' in R: |
| install.packages('gap.datasets', repos = c('https://jinghuazhao.r-universe.dev', 'https://cloud.r-project.org')) |
The latest version of this package failed to build. Look at thebuild logs for more information.
Bug tracker:https://github.com/jinghuazhao/r/issues
- CDKNgenes - An example data for regional association plot
- CDKNlocus - An example data for regional association plot
- CDKNmap - An example data for regional association plot
- OPGall - An example data for forest plot using METAL output
- OPGrsid - An example data for forest plot using METAL output
- OPGtbl - An example data for forest plot using METAL output
- PD - A study of Parkinson's disease and APOE, LRRK2, SNCA makers
- aldh2 - ALDH2 markers and Alcoholism
- apoeapoc - APOE/APOC1 markers and Alzheimer's
- cf - Cystic fibrosis data
- cnv - A CNV data
- crohn - Crohn's disease data
- fa - Friedreich Ataxia data
- fsnps - A case-control data involving four SNPs with missing genotype
- hla - The HLA data
- hr1420 - An example data for Manhattan plot with annotation
- inf1 - A data containing protein panel
- jma.cojo - A data containing independent GWAS hits as from GCTA
- l51 - An example pedigree data
- lukas - An example pedigree
- mao - A study of Parkinson's disease and MAO gene
- meyer - A pedigree data on 282 animals deriving from two generations
- mfblong - Example data for ACEnucfam
- mhtdata - An example data for Manhattan plot with annotation
- nep499 - A study of Alzheimer's disease with eight SNPs and APOE
- w4 - Results from a GWAS on Chickens
Last updated 3 months agofrom:e876b5c889. Checks:OK: 1. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Jun 13 2024 |
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