Package: tdthap 1.3
tdthap: TDT Tests for Extended Haplotypes
Functions and examples are provided for Transmission/disequilibrium tests for extended marker haplotypes, as in Clayton, D. and Jones, H. (1999) "Transmission/disequilibrium tests for extended marker haplotypes". Amer. J. Hum. Genet., 65:1161-1169, <doi:10.1086/302566>.
Authors:
tdthap_1.3.tar.gz
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tdthap.pdf |tdthap.html✨
tdthap/json (API)
# Install 'tdthap' in R: |
install.packages('tdthap', repos = c('https://jinghuazhao.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/jinghuazhao/r/issues
Last updated 22 days agofrom:c749ce7e07. Checks:OK: 9. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 18 2024 |
R-4.5-win-x86_64 | OK | Nov 18 2024 |
R-4.5-linux-x86_64 | OK | Nov 18 2024 |
R-4.4-win-x86_64 | OK | Nov 18 2024 |
R-4.4-mac-x86_64 | OK | Nov 18 2024 |
R-4.4-mac-aarch64 | OK | Nov 18 2024 |
R-4.3-win-x86_64 | OK | Nov 18 2024 |
R-4.3-mac-x86_64 | OK | Nov 18 2024 |
R-4.3-mac-aarch64 | OK | Nov 18 2024 |
Exports:get.similarityhap.transmitset.similaritytdt.quadtdt.rrtdt.select
Dependencies:
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Interogate similarity function for Geary-Moran TDT tests | get.similarity |
Build parental haplotypes in nuclear families | hap.transmit |
Set similarity function for Geary-Moran type TDT tests | set.similarity |
TDT tests for extended haplotypes | tdt.quad |
Calculate haplotype relative risks in TDT studies | tdt.rr |
Select informative transmissions of sub-haplotypes for the TDT test | tdt.select |