Package: gaawr2 0.0.9

gaawr2: Genetic Association Analysis

This is a companion to Henry-Stewart talk by Zhao (2026, <doi:10.69645/FRFQ9519>), which gathers information, metadata and scripts to showcase modern genetic analysis -- ranging from testing of polymorphic variant(s) for Hardy-Weinberg equilibrium, association with traits using genetic and statistical models, Bayesian implementation, power calculation in study design, and genetic annotation. It also covers R integration with the Linux environment, GitHub, package creation and web applications. The earlier version by Zhao (2009, <doi:10.69645/DCRY5578>) provides a brief introduction to these topics.

Authors:Jing Hua Zhao [aut, cre], Benjamin Altmann [ctb], Brian Ripley [ctb]

gaawr2_0.0.9.tar.gz
gaawr2_0.0.9.zip(r-4.7-any)gaawr2_0.0.9.zip(r-4.6-any)gaawr2_0.0.9.zip(r-4.5-any)
gaawr2_0.0.9.tgz(r-4.6-any)gaawr2_0.0.9.tgz(r-4.5-any)
gaawr2_0.0.9.tar.gz(r-4.7-any)gaawr2_0.0.9.tar.gz(r-4.6-any)
gaawr2_0.0.9.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
gaawr2/json (API)

# Install 'gaawr2' in R:
install.packages('gaawr2', repos = c('https://jinghuazhao.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/jinghuazhao/gaawr2/issues

Pkgdown/docs site:https://jinghuazhao.github.io

On CRAN:

Conda:

4.70 score 5 scripts 381 downloads 1 exports 71 dependencies

Last updated from:4a89c0f6b1. Checks:7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develNOTE248
source / vignettesOK471
linux-releaseNOTE278
macos-releaseNOTE135
macos-oldrelNOTE398
windows-develNOTE138
windows-releaseNOTE257
windows-oldrelNOTE174
wasm-releaseOK200

Exports:welcome

Dependencies:askpassbase64encbslibcachemclicpp11crosstalkcurldata.tabledigestdplyrevaluatefarverfastmapfontawesomefsgapgap.datasetsgenericsggplot2gluegtablehighrhtmltoolshtmlwidgetshttrisobandjquerylibjsonliteknitrlabelinglaterlatticelazyevallifecyclemagrittrMatrixmemoisemimeopensslotelpillarpkgconfigplotlypromisespurrrR6rappdirsrbibutilsRColorBrewerRcppRdpackrlangrmarkdownS7sassscalesstringistringrsurvivalsystibbletidyrtidyselecttinytexutf8vctrsviridisLitewithrxfunyaml

Genetic Association Analysis
Hello, world! | R | Linux | Language elements | Data analysis | HardyWeinberg | SNPassoc | haplo.stats | GWAS | GMMAT | h2.jags | powerEQTL | Annotations | EnsDb.Hsapiens.v75 | biomaRt | Experimental Factor Ontology (EFO) | OpenTargets | Additional packages | gaawr2 | Summary | References
Rendered fromgaawr2.Rmdusingknitr::rmarkdown

Last update: 2026-10-23
Started: 2025-01-14

Web Facilities
Hello, world! | Python | R | URL availability | Data source | A meta-analysis | plumber | Data access | Browser/console | httpuv | References
Rendered fromweb.Rmdusingknitr::rmarkdown

Last update: 2026-10-23
Started: 2025-01-14